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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015817660.1_cds_XP_016499268.1_13206
CDS Infomation

[gene=LOC107817890] [db_xref=GeneID:107817890] [protein=probable LRR receptor-like serine/threonine-protein kinase At4g36180] [protein_id=XP_016499268.1] [location=join(57015..57408,58292..58432,58540..58629,59159..59236,59725..59871,60151..62321)] [gbkey=CDS]
Sequence

ATGAGAGAATTCTGCTTGTGGATGTTAATTTTGTTCTTAGCAAATGAGTGGTGTAGCTGT
TATGGTTGTTGGAAAGAAGAAAGAATTGCTCTTTTGAAACTCAAAGAAAACATAAACTAC
ACAAATGGTGCATATTTTTCAACATGGGTAGCTAATGAAACTTCAAATTGTTGTCAATGG
GAAGGAATTATTTGCAGCAACAGTAGCAGAAAAGTCACAGAGTTGTCAATATCAGTGAAG
ACTTTTATTAAAAAGGATATTTCTGGCATTGAAAGTTTAAATACTGATAATTGGAGAAAT
TGGCATTTCAATGCATCTTTGTTTCTTCCTTTCAAGAATCTCAAAGCTCTTCTTCTCCGC
GGACATTCTATAGCTAATTGGATTGAGAATGAAGGTTTCGAAAAACTGAAACAACTAACA
AAACTGGAAAAGCTAGATTTGGCTGGGAACAACTTCAATCGCAGCATATTTCCATCTCTT
AGTCAACTTACATCTCTCAAGTCACTGAACCTCGGACGTAACAACATTGAATCAGGTAAT
GAAAGATTGTCAGGGTTAAGCAATCTGGAGAGCTTAGATTTAAGCGTTAACAGATTGAAT
GATGAAAGTGTTCTCTCTGCTCTAGAGCTAAATACATTTAGTACAACTTTGAAGAAGCTC
AATATAAGGTACAACAGTTTTCAAAGCTTTATGCCAAATGAAGAGTTGGGAATTCTGAGA
AATATAAAGTATTTACTTTTGGATGGGAATACATTGGACAAAAACTTTCTACAGAGCAGT
GGTGTAATGCCGTCCCTTAAAGTATTATCAGTATCTAACTGCGGCCTGAATGGAACCCTA
CCTATTCCAGGTTTATGCAATCTAAAATATCTTGAAGAACTAAGTCTCAGCTTCAACAAC
TTCCATGGAAATCTTCCTCCATGTCTTGGAAACTTAACATTACTTCGGGTAATTGATCTC
ACTCAAAATCAGTTTACGGGAAATATTGCCTCATCTCCACTTTCAAGTCTTTTGTCCCTT
GAATATCTTTTGCTGAAAAACAACAACTTTGAAATCCCAATTTCATTCGAGTCATTTGCT
AACCATTCAAACCTTAAGTATGTCATTCCTGACGGCAATTCATTAGTTGTAAAAACTTCT
ACTAGAAATTGGATCCCAAAGTTTCAATTGGAAGCCTTGTCTTTGACTAAAAACTGCTCT
GTAATACCAAATTTCCTTCATTATCAACATCAGTTGCGTCAACTTAGTCTATCTGACTGC
AACATTGGTGGAAACTTTCCAAATTGGTTGTTGGAGAATAATCCTAGACTTGAAGAAGTT
TATTTGGATGGAAATGCGTTCACTGGATCTCTTCATGAGTTGTCCTTCCTTCCTAATATG
AAATTTTTTGATATCTCAAGGAACAAGATTCAGGGACAACTTCCTCCCAACATCAGTTCC
ATTTTCCCGAATATCTTGAGGTTAAAAATGTCCAACAATATGCTTGAAGGCATGTTGCCT
TCAAGTTTTAGCGACATGAAGAACCTACTTTTCTTGGATTTAGCAGATAATAAGTTATCA
GGAGACTTACCGATTGAATTGGCTCGTAATGGATTATTCTTTCTGAGACTGTCGAATAAC
ATGTTGGAAGGGGAAATATTTCCAGTGTCAACCAACATCAATAATCTTCAGTACTTATAC
TTGGATGGAAACAACTTCTCAGGCTCAATTCCACAAAAGTTGTCCTCTGCTTCCTTGAGT
TCACTGGATTTAAGTAACAACAGTTTGTCTGGAAATCTACCTTCTTGGATTGGTTACATC
CCCTCATTAACCTCCCTCGCGTTATCTAGAAACCATCTAAAGGGTCCTATTCCAGCAGAT
TATTGTAGACTTGAAAAGCTTGAGGTTTTAGATCTCTCAAGAAACAACCTTGTTGGTGTG
ATTCCATCATGTTTCAGTGCTTCCCAAAACCTTAAACGTGTCTATTTGAGCAAAAACAAT
TTACGAGGGCAATTCGATGTGTTCTCAAATAGCTCAGATTTAACGGTATTGGATCTTAAA
GATAACAACTTCACCGGTTCAATTCCAAAATGGTTAGGCAGTATTGAAATAAACACCTTA
CTCTTGAAAGGAAACCATCTTCAAGGCAACATTCCCACAGAGTTGTGCCATGCGAGTGAA
TTGAGAATCATGGATCTGTCTCATAATAATCTCTCGGGACCTATTCCTCGTTGCTTTGGA
AACATAATGCAAATAGCAGGGATCAGTGAAGCATATCCCTACGGTCCAATATTTAGTTAT
CCAAGACTCCAGACGTGGGGTAGAGATACCATGGTATATGTAGAAGATTCAATGGAGAGA
TCGACAGTTTCCTATCAAGATAACTATGCATGGGTTGGGGCAGAGTTTACAACCAAATAT
AATACGTATTCCTATGAAGGTAGCATTGTTGATTATATGTTTGGGATTGATCTTTCTTAC
AACCAATTAAGTGGTGACATACCTAAGGAACTCTGTAATCTTACTGAAATTCGGGCACTA
AACTTGTCACATAACCACATAACTGGCGCGATATCATCAGAATTCTCAAATCTCCAGAAT
ATTGAGAGTTTGGATCTATCATACAACAACTTGACTGGGAGGATTCCCTCTCAACTTGTA
GAGTTGACAAGTCTAGCAATTTTTAGCGTGGCACATAATAATTTAACAGGTATGACTCCA
CAGCGTACATCTCAATTTGCAACTTTCACTGATAGCAGTTACCAGGGAAATCCTTTTCTT
TGTGGTACTCCATTACATATCAATTGCATGGAGACCAAAGAGATACCAATATCACCTCGT
GCGCCAGATTTCTGTGAAGATGATACTGGTTTTCTAGATATGGAGTCGTTCTATATTTCT
TTTCTTGTGGCATATGCAAATTTGGTGCTTGTAATTGCTGTAGTCCTTTGGCTAAACCCC
TATTGGAGATATGTTTGGTTTTATTACATTGAGTCTTTTATGTATTCATGTTACTATCTT
TTTGCTTCCAAATGTACATGA

Peptide Sequence

PEP ID

XP_016499268.1
PEP Infomation

PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Nicotiana tabacum]
Sequence

MREFCLWMLILFLANEWCSCYGCWKEERIALLKLKENINYTNGAYFSTWVANETSNCCQW
EGIICSNSSRKVTELSISVKTFIKKDISGIESLNTDNWRNWHFNASLFLPFKNLKALLLR
GHSIANWIENEGFEKLKQLTKLEKLDLAGNNFNRSIFPSLSQLTSLKSLNLGRNNIESGN
ERLSGLSNLESLDLSVNRLNDESVLSALELNTFSTTLKKLNIRYNSFQSFMPNEELGILR
NIKYLLLDGNTLDKNFLQSSGVMPSLKVLSVSNCGLNGTLPIPGLCNLKYLEELSLSFNN
FHGNLPPCLGNLTLLRVIDLTQNQFTGNIASSPLSSLLSLEYLLLKNNNFEIPISFESFA
NHSNLKYVIPDGNSLVVKTSTRNWIPKFQLEALSLTKNCSVIPNFLHYQHQLRQLSLSDC
NIGGNFPNWLLENNPRLEEVYLDGNAFTGSLHELSFLPNMKFFDISRNKIQGQLPPNISS
IFPNILRLKMSNNMLEGMLPSSFSDMKNLLFLDLADNKLSGDLPIELARNGLFFLRLSNN
MLEGEIFPVSTNINNLQYLYLDGNNFSGSIPQKLSSASLSSLDLSNNSLSGNLPSWIGYI
PSLTSLALSRNHLKGPIPADYCRLEKLEVLDLSRNNLVGVIPSCFSASQNLKRVYLSKNN
LRGQFDVFSNSSDLTVLDLKDNNFTGSIPKWLGSIEINTLLLKGNHLQGNIPTELCHASE
LRIMDLSHNNLSGPIPRCFGNIMQIAGISEAYPYGPIFSYPRLQTWGRDTMVYVEDSMER
STVSYQDNYAWVGAEFTTKYNTYSYEGSIVDYMFGIDLSYNQLSGDIPKELCNLTEIRAL
NLSHNHITGAISSEFSNLQNIESLDLSYNNLTGRIPSQLVELTSLAIFSVAHNNLTGMTP
QRTSQFATFTDSSYQGNPFLCGTPLHINCMETKEIPISPRAPDFCEDDTGFLDMESFYIS
FLVAYANLVLVIAVVLWLNPYWRYVWFYYIESFMYSCYYLFASKCT

Transcript Sequence

Gene sequence data has not been registered.